CDS

Accession Number TCMCG005C28772
gbkey CDS
Protein Id XP_020277313.1
Location join(46003487..46003556,46003701..46003762,46003850..46003942,46004044..46004116,46010305..46010351,46010353..46010584,46010667..46010731,46011070..46011201,46011785..46011826,46011933..46012460,46012561..46012715,46013992..46014472,46014684..46014746,46014846..46014947,46015048..46015365,46015449..46015541,46015644..46015745,46015848..46015952,46016284..46016417,46017014..46017197,46017504..46017635,46017724..46017836,46017924..46018005,46019543..46021090)
Gene LOC109851539
GeneID 109851539
Organism Asparagus officinalis

Protein

Length 1651aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020421724.1
Definition LOW QUALITY PROTEIN: protein TSS-like

EGGNOG-MAPPER Annotation

COG_category S
Description Translation initiation factor eIF3 subunit 135
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03255        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGCCTCCAAGAGCTGGACGTGGCAAGGGGCACAAAGGCAAGGGAGAGAAGAAGAAAAAGGAAGAAAGAGTTGTGCCTAGTGTGATTGATGTAACAGTAGAAACTCCCTATGAAACCCAGGTCACACTCAAGGGGATATCTACTGATAAGATACTCGATGTGAGAAAGCTGCTAGCCTCCAATGTGCAGACTTGTCACCTAACCAATTATTCATTAGCTCATGGGACCCGTGGACAACGGTTGGAGGATGGTGCGGAAATTGCGAGTCTGAAGCCATGTCTTTTGAGAATTGTGGAAGAGCCGTACGCGTCGGAGGACCAGGCCGCCGCGCACGTGCGGANNNNNNNNNGCACCAGCGCCTTCGGCCGAAAGACCAAAAGGCCCTCGACAGATGCCAAAATCCCACCCGGGTCTTCGCCGTCATCTTCCCCGTCCCCGGGCGCGACTCTCGATGCCGACCCAGCGTCGGTTCCCGCCATATCCGACAAGTTCGACATGGCGCCGATCCAGCCGCCGCCGAAGCTCGGCGATTTCTACGAGTTCTTCTCTTTCTCCCATTTGCCCTCGCCTGTACAATTTTTGCGGCGGCGCGAAGGTGGTAGCGCTGGAGGGGGCAAGGATGGGGATCACTTTGAGATTGAGGTTAAGGTTTGTAATGGCAAACTGCTCAATGTGGTTGCTTCTGTTGAGGGGTTCTATACAAGATGCAAGCAATGTGTTTTGAGCCACACGCTAGTGGATCTTTTGCAGCAGCTTAGCAGCGCATTCACAAATGCCTATGAGTCCCTAATGAAAGCTTTTATGGAGCATAACAAGTTTGGTAATCTGCCTTATGGATTTCGAGCAAATACATGGCTTGTACCTCCTCTGTTAGTCGAGCCCTCTTCCAAATGTCTCTCCCTGCCAACTGAAGATGAAAGATGGGGAGGAAATGGTGGTGGGCATGGACGAAATGGTAAATATGATCATAGGCAGTGGTCAAAAGATTTCTCGATTTTGGCTAGGATACCATGCAAAACTGAAGAAGAGAGATTAGATCGAGATCGAAAGGCCTTTTTGTTGCACAGTCTGTTCATTGACACTTCAATATTTAAAGCTGTTTCTCTCATTCGTAATCTCATTGATTCGAACAAGCAAAAAAGTTCGTTGAAAGAAGATGCTCCTATTTTGCTTGAGGAAACTATAGGAGATTTGAGTATAGTAGTGAAAAGAGATTTGAAAGATGCTAGTGTGAAGCTTGAAGAGAAAGTCGATGGCAGTCACTTCCCCCATATGTGTACTAATGATGTTTCCATGAGAAATATGCTTAAAGGTCTAACTGCTGACGAGAGTGTGGTTGTTCGAGATACTGTTACCTTGGGAGTTGTCATTGTAAAGCATTGTGGCTATACTGCTACTGTTAAAGTCTCAGGTCATGTAAATGAGGTTGATCCTCTACAAGAGAGTATTGACATTGATGAACAGCCAGATGGAGGTTCAAATGCTCTTAATATTAATAGTTTAAGAGTATTGCTTCCGAGGTTTGCTGAACCAGAATCATCTCCAAGCAATCAGTGTTCTCCTTCTAATTCTAATAATACACGAGAAGCACGAGGTTTAGTGAGAAATGTACTTAAAGATAGTTTGATAAAGTTAGAAAAACTACCCGAGAGTAAGGAGAAGCCCTTCAGATGGGAACTGGGTACTTGCTGGATTCAACACTTACAAAAACAGGAGACTTCAAAGGGGGAGGAGACTAAAGACAATGTGCAAGACAGTTTGGTGGTTAAAGGTCTTGGAAAGCAATTTGAGCCTCTGAAGAAAATAAAGAAGAAAACAGATCATACTGCTGATACCATGGTGTGTGAAGAAATGACGGATACATTGGATACGCGGAAAATAAAACAGTGCCAAACAAATGAGAATAATGGAATAAGGGAATTTCTAACAGAAGAAGATTTCTTACGGTTAAAAGATTCTGGGACTGGTCTTCATCAAAAGTCGCCAGATGAGCTTATCAAGATGGCACAAAAATATTACGATGATATTGCTCTTCCTAAGCTGGTAGCCGATTTTGCTTCACTTGAACTTTCTCCTGTAGATGGAAGAACTCTAACAGATTTCATGCATACAAGGGGACTTAAAATATGTTCTTTGGGACATATAGTTGAACTTGCAGAAAAGCTACCACATATACAATCTCTTTGCATTCATGAGATGGTTACTCGAGCCTTCAAGCACATACTTCGAGCTGTCATTGCTTCTGTGAACAATCTTTCAGATCTTTCTGCTGCAATTGCTGAAGGTTTGAACGTCCTGCTGGGATCCTCGAAAGGGGAAACTGTTGACCAGGACTTATCTGATGCGTGTGACCTCAAGATGAAGTGGTTGGAGACCTTCATTTCAAGAAGATATAGCTGGAAGCTAAGAGAAGAATTTCAGCACCTGAGGAAATTTGTACTTCTCCGAGGACTTTGCCAGAAGGTTGGACTTGAGCTCATCCCTAGAGACTATGACATGGAGAGTCCAAACCCATTTGACAAGTCTGATATTATCAGCATGGTTCCTGTGTGCAAGCATGTTGTCTGCTCATCAGCAGATGGCCGGAACTTATTGGAGTCGTCAAAAACAGCACTAGATAAAGGAAAGTTGGAGGATGCCGTTACCTTTGGTACAAAGGCACTAGCAAAGATGATAGCAGTTTGTGGCCCTTACCACCGAATGACTGCAAATGCTTACAGTCTGCTTGCAGTAGTTCTTTACCATACTGGAGACTTTAATCAGGCAACAATATACCAACAAAAGGCTCTGGATATTAATGAAAGGGAGCTTGGTCTTGATCATCCAGAGACCATGAAAAGTTATGGGGATCTTTCTGTCTTCTACTATCGGCTCCAACACATTGAACTGGCTTTAAAGTATGTTAACCGTGCACTTTATCTTCTTCAATTCTCATGTGGGCTATCACATCCAAATTCTGCTGCAACATATATTAATGTTGCAATGATGGAAGAGGGCATGGGAAATGTTCATGTTGCGCTCAGATACCTGCATGAAGCTCTTAAATGCAACCAAAGATTATTGGGAGCTGATCACATACAGACTGCTGCTAGCTATCATGCCATTGCCATAGCTCTTTCCATGATGGATGCTTATACTCTCAGCATGCAACATGAACAAACCACCTTGCAGATACTTCAAGCCAAACTAGGATCTGAAGATCTTCGTACTCAGGATGCTGCTGCATGGCTTGAATATTTTGAGTCAAGAGCTCTCGAACAACAAGAGGCTGCACGTAGAGGTATCCCAAAGCCTGATGCTTCTATTGCAAGCAAAGGTCATCTCAGTGTATCGGATCTTCTTGATTATATAAATCCAGATCAAGACATCAAAGAAAGAGATACACAGAGAAGACAACGGCGTGCAAAGAACACAAATAGAGCTAGTCAAGAGCAATATGTCATGACTGCAGATGGTTTAGAGAACATAACAATCCCCAAAATTCCTCATGCTCTGCATCAAGAATCTGTGGAGGATCCAAAGTCCAGAGAACGTCGTATAGAAAAGTTCAAAGAAACAGAAAGAACAACTCAACTCGAGCCAAGACAGGTCGATGTAGTATCTGGTGACGAATACTCAGATGAAGGGTGGCAAGAGGCTAGCACAAGAGGACGGTCTGCACAAATGCGAAGAAAATCTGGTTCTAGAAGACCAGCTCTTGCTAAGTTAGTGATAAACAACTCAAGCTCCAGAAGTTCCAGTTATAAGTCAAGAACGGAATTACCTCAGGTTAAATCAAGCACGACACCAACAAAAACAACGCCTAATGGTGTTCCTAGTGAGAAGTTGAAACAAGCTAAGGCTCCCAAAACAGAAGCAAGAGCTTCAGGTACAACTAGACTCGGTGTAGTGGCTTCAAAAACTGTATCTTACAAAGAAGTAGCAATATCACCACCTGGCACAGTTTTGAAGCCAGCAGTGGACCAACTTGAAGAAAATTTGGTTCCAGAATCAGACAGTTCTCTAGAGACCCGCAAAGGGGAGGATGCAGCATTGACACAAGAAACAGCTCAAGAGGAAGCGTCGAGTGACAACAGCGAGAAAGATACAACCCTGAGCGAAGTGGAGAAACCTTCTTCAAGTTCTGACGAAACTCAAGAGTCTGAATCAATGAATTCCACAAAAAAGAGAAGCAAACTTTCAGCTTCGGCTCCTCCCTTCAATCCAGGCTCGTTACTGTCTACATCACATCCTTACAACTCTGTGGCAGTTGGTGATCTCTATGATGCCAGAATAGCTCATCAGACGATTGTACCTCAACCTATTGAAATTCCATCTCCTCAGTCTGTAGACACAAGAGTCCCCCGTGGCCCTCGATCAGCTCTTTACTACCGAACTGGGCACACTTTCAGGAAAAGACATGGGTACCCAAATGGCCAAAACACTGTCACAGGTAAAAATAACACTGTTCCTAGTGCAATGAACCCTCATGCTGCTGAGTTTGTGCCTGGAAAGGCTTGGCAACATGCTGAGAGGGAGGAAACTGATATTTTGCAGCCATCTAAGTCCCAAAGGTCAGAACCAGCGATCACCACTACAGGAGAGGAAAATTCTGAGCCTGAAAAGAAACCTCAAGTCGGAAAATTTTCCAGTGAAGGTGATAAAAGCAAGCAAAGTTTAGAAAGGGCAGAGCTTGCAAGACAGATGCTATTCAAATTCATCGTCAAGTCCGTTTTGAACTCGTCAAATGATAATGAAGCTGAGGCTGAGGCTACAATCAAAATGTCTGAAGGCGATAAAAGCACAGGTAAACAGACACAAAGTAATGAGAAATTGAAACCCGATGTGCATAAAAGTAAGAAGCAAGATACTGAAGGATTTACAGTAGTCTCAAATAGGAGGAAAAATAAGCATCAATTCACCAATACAGTTCCTGGTTTGTATAGCCAGCAATCTGTTTGCACCTCAGTCAGCTGA
Protein:  
MPPRAGRGKGHKGKGEKKKKEERVVPSVIDVTVETPYETQVTLKGISTDKILDVRKLLASNVQTCHLTNYSLAHGTRGQRLEDGAEIASLKPCLLRIVEEPYASEDQAAAHVRXXXXTSAFGRKTKRPSTDAKIPPGSSPSSSPSPGATLDADPASVPAISDKFDMAPIQPPPKLGDFYEFFSFSHLPSPVQFLRRREGGSAGGGKDGDHFEIEVKVCNGKLLNVVASVEGFYTRCKQCVLSHTLVDLLQQLSSAFTNAYESLMKAFMEHNKFGNLPYGFRANTWLVPPLLVEPSSKCLSLPTEDERWGGNGGGHGRNGKYDHRQWSKDFSILARIPCKTEEERLDRDRKAFLLHSLFIDTSIFKAVSLIRNLIDSNKQKSSLKEDAPILLEETIGDLSIVVKRDLKDASVKLEEKVDGSHFPHMCTNDVSMRNMLKGLTADESVVVRDTVTLGVVIVKHCGYTATVKVSGHVNEVDPLQESIDIDEQPDGGSNALNINSLRVLLPRFAEPESSPSNQCSPSNSNNTREARGLVRNVLKDSLIKLEKLPESKEKPFRWELGTCWIQHLQKQETSKGEETKDNVQDSLVVKGLGKQFEPLKKIKKKTDHTADTMVCEEMTDTLDTRKIKQCQTNENNGIREFLTEEDFLRLKDSGTGLHQKSPDELIKMAQKYYDDIALPKLVADFASLELSPVDGRTLTDFMHTRGLKICSLGHIVELAEKLPHIQSLCIHEMVTRAFKHILRAVIASVNNLSDLSAAIAEGLNVLLGSSKGETVDQDLSDACDLKMKWLETFISRRYSWKLREEFQHLRKFVLLRGLCQKVGLELIPRDYDMESPNPFDKSDIISMVPVCKHVVCSSADGRNLLESSKTALDKGKLEDAVTFGTKALAKMIAVCGPYHRMTANAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPETMKSYGDLSVFYYRLQHIELALKYVNRALYLLQFSCGLSHPNSAATYINVAMMEEGMGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSMMDAYTLSMQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESRALEQQEAARRGIPKPDASIASKGHLSVSDLLDYINPDQDIKERDTQRRQRRAKNTNRASQEQYVMTADGLENITIPKIPHALHQESVEDPKSRERRIEKFKETERTTQLEPRQVDVVSGDEYSDEGWQEASTRGRSAQMRRKSGSRRPALAKLVINNSSSRSSSYKSRTELPQVKSSTTPTKTTPNGVPSEKLKQAKAPKTEARASGTTRLGVVASKTVSYKEVAISPPGTVLKPAVDQLEENLVPESDSSLETRKGEDAALTQETAQEEASSDNSEKDTTLSEVEKPSSSSDETQESESMNSTKKRSKLSASAPPFNPGSLLSTSHPYNSVAVGDLYDARIAHQTIVPQPIEIPSPQSVDTRVPRGPRSALYYRTGHTFRKRHGYPNGQNTVTGKNNTVPSAMNPHAAEFVPGKAWQHAEREETDILQPSKSQRSEPAITTTGEENSEPEKKPQVGKFSSEGDKSKQSLERAELARQMLFKFIVKSVLNSSNDNEAEAEATIKMSEGDKSTGKQTQSNEKLKPDVHKSKKQDTEGFTVVSNRRKNKHQFTNTVPGLYSQQSVCTSVS